CA5B carbonic anhydrase 5B [Canis lupus familiaris (dog)] - Gene

Summary

Official Symbol: CA5Bprovided by VGNC
Official Full Name: carbonic anhydrase 5Bprovided by VGNC
Primary source: VGNC:VGNC:38613
See related: Ensembl:ENSCAFG00845030759
Gene type: protein coding
RefSeq status: MODEL
Organism: Canis lupus familiaris (sub-species: familiaris)
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs: human mouse all
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Genomic context

Location:: chromosome: X

Exon count:: 15

Annotation release	Status	Assembly	Chr	Location
106	current	ROS_Cfam_1.0 (GCF_014441545.1)	X	NC_051843.1 (11869327..12003333)
106	current	Dog10K_Boxer_Tasha (GCF_000002285.5)	X	NC_006621.4 (11809477..11892620)
106	current	UU_Cfam_GSD_1.0 (GCF_011100685.1)	X	NC_049260.1 (11951875..12085347)
106	current	UMICH_Zoey_3.1 (GCF_005444595.1)	X	NC_049299.1 (11932374..12072571)
106	current	UNSW_CanFamBas_1.0 (GCF_013276365.1)	X	NC_049780.1 (11926678..12059951)

Chromosome X - NC_051843.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Homology

NCBI Orthologs

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables carbonate dehydratase activity	IEA Inferred from Electronic Annotation more info	PubMed
enables zinc ion binding	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info	PubMed
located_in mitochondrion	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: LOW QUALITY PROTEIN: carbonic anhydrase 5B, mitochondrial; carbonic anhydrase 5B, mitochondrial

Names: carbonic anhydrase VB, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

NC_051843.1 Reference ROS_Cfam_1.0

Range

11869327..12003333

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038449463.1 → XP_038305391.1 carbonic anhydrase 5B, mitochondrial isoform X1

UniProtKB/TrEMBL

A0A8I3Q569

Conserved Domains (1) summary

cl00012
Location:99 → 286

alpha_CA; Carbonic anhydrase alpha (vertebrate-like) group. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...
XM_038449462.1 → XP_038305390.1 carbonic anhydrase 5B, mitochondrial isoform X1

UniProtKB/TrEMBL

A0A8I3Q569

Conserved Domains (1) summary

cl00012
Location:99 → 286

alpha_CA; Carbonic anhydrase alpha (vertebrate-like) group. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...
XM_038449464.1 → XP_038305392.1 carbonic anhydrase 5B, mitochondrial isoform X2

UniProtKB/TrEMBL

A0A8I3Q569

Conserved Domains (1) summary

cl00012
Location:71 → 258

alpha_CA; Carbonic anhydrase alpha (vertebrate-like) group. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...
XM_038449465.1 → XP_038305393.1 carbonic anhydrase 5B, mitochondrial isoform X3

UniProtKB/TrEMBL

A0A8I3Q569

Related

ENSCAFP00845042958.1, ENSCAFT00845054635.1

Conserved Domains (1) summary

cl00012
Location:43 → 230

alpha_CA; Carbonic anhydrase alpha (vertebrate-like) group. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...
XM_038449466.1 → XP_038305394.1 carbonic anhydrase 5B, mitochondrial isoform X3

UniProtKB/TrEMBL

A0A8I3Q569

Conserved Domains (1) summary

cl00012
Location:43 → 230

alpha_CA; Carbonic anhydrase alpha (vertebrate-like) group. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...

Alternate UMICH_Zoey_3.1

Genomic

NC_049299.1 Alternate UMICH_Zoey_3.1

Range

11932374..12072571

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038522888.1 → XP_038378816.1 carbonic anhydrase 5B, mitochondrial isoform X4

Conserved Domains (1) summary

cl00012
Location:117 → 352

alpha_CA; Carbonic anhydrase alpha (vertebrate-like) group. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...
XM_038522892.1 → XP_038378820.1 carbonic anhydrase 5B, mitochondrial isoform X1

Conserved Domains (1) summary

cl00012
Location:99 → 286

alpha_CA; Carbonic anhydrase alpha (vertebrate-like) group. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...
XM_038522886.1 → XP_038378814.1 carbonic anhydrase 5B, mitochondrial isoform X4

Conserved Domains (1) summary

cl00012
Location:117 → 352

alpha_CA; Carbonic anhydrase alpha (vertebrate-like) group. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...
XM_038522889.1 → XP_038378817.1 carbonic anhydrase 5B, mitochondrial isoform X5

Conserved Domains (1) summary

cl00012
Location:89 → 324

alpha_CA; Carbonic anhydrase alpha (vertebrate-like) group. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...
XM_038522890.1 → XP_038378818.1 carbonic anhydrase 5B, mitochondrial isoform X6
XM_038522891.1 → XP_038378819.1 carbonic anhydrase 5B, mitochondrial isoform X6

Alternate UNSW_CanFamBas_1.0

Genomic

NC_049780.1 Alternate UNSW_CanFamBas_1.0

Range

11926678..12059951

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038651394.1 → XP_038507322.1 LOW QUALITY PROTEIN: carbonic anhydrase 5B, mitochondrial isoform X7

Alternate UU_Cfam_GSD_1.0

Genomic

NC_049260.1 Alternate UU_Cfam_GSD_1.0

Range

11951875..12085347

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038586881.1 → XP_038442809.1 carbonic anhydrase 5B, mitochondrial isoform X8
XM_038586886.1 → XP_038442814.1 carbonic anhydrase 5B, mitochondrial isoform X11
XM_038586880.1 → XP_038442808.1 carbonic anhydrase 5B, mitochondrial isoform X8
XM_038586882.1 → XP_038442810.1 carbonic anhydrase 5B, mitochondrial isoform X9
XM_038586884.1 → XP_038442812.1 carbonic anhydrase 5B, mitochondrial isoform X10
XM_038586885.1 → XP_038442813.1 carbonic anhydrase 5B, mitochondrial isoform X10

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

NC_006621.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

Range

11809477..11892620

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038464582.1 → XP_038320510.1 carbonic anhydrase 5B, mitochondrial isoform X2

UniProtKB/TrEMBL

A0A8I3Q569

Conserved Domains (1) summary

cl00012
Location:71 → 258

alpha_CA; Carbonic anhydrase alpha (vertebrate-like) group. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...
XM_038464581.1 → XP_038320509.1 carbonic anhydrase 5B, mitochondrial isoform X12

Conserved Domains (1) summary

cl00012
Location:89 → 324

alpha_CA; Carbonic anhydrase alpha (vertebrate-like) group. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...
XM_003640227.4 → XP_003640275.1 carbonic anhydrase 5B, mitochondrial isoform X13

UniProtKB/TrEMBL

A0A8C0SJ70, A0A8P0SH46

Conserved Domains (1) summary

cl00012
Location:61 → 296

alpha_CA; Carbonic anhydrase alpha (vertebrate-like) group. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...
XM_022416371.2 → XP_022272079.1 carbonic anhydrase 5B, mitochondrial isoform X13

UniProtKB/TrEMBL

A0A8C0SJ70, A0A8P0SH46

Conserved Domains (1) summary

cl00012
Location:61 → 296

alpha_CA; Carbonic anhydrase alpha (vertebrate-like) group. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...