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SLC35D3 solute carrier family 35 member D3 [ Canis lupus familiaris (dog) ]

Gene ID: 100856033, updated on 17-Aug-2024

Summary

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Official Symbol
SLC35D3provided by VGNC
Official Full Name
solute carrier family 35 member D3provided by VGNC
Primary source
VGNC:VGNC:46372
See related
Ensembl:ENSCAFG00845006386
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See SLC35D3 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 1 NC_051805.1 (29587167..29590852)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 1 NC_006583.4 (30308618..30312294)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 1 NC_049222.1 (29656307..29659976)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 1 NC_049261.1 (29472073..29475736)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 1 NC_049742.1 (29357253..29360919)

Chromosome 1 - NC_051805.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S20-like Neighboring gene mitogen-activated protein kinase kinase kinase 5 Neighboring gene uncharacterized LOC119870737 Neighboring gene peroxisomal biogenesis factor 7 Neighboring gene prefoldin subunit 1-like Neighboring gene interleukin 20 receptor subunit alpha Neighboring gene uncharacterized LOC111090644

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables antiporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: solute carrier family 35 member D3; solute carrier family 35 member D3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051805.1 Reference ROS_Cfam_1.0

    Range
    29587167..29590852
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038653712.1 → XP_038509640.1  solute carrier family 35 member D3

    UniProtKB/TrEMBL
    A0A8C0R638, A0A8C0RVH0, A0A8I3NE49, A0A8P0N3L4
    Related
    ENSCAFP00845008842.1, ENSCAFT00845011327.1
    Conserved Domains (1) summary
    COG5070
    Location:30 → 314
    VRG4; Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049261.1 Alternate UMICH_Zoey_3.1

    Range
    29472073..29475736
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038465003.1 → XP_038320931.1  LOW QUALITY PROTEIN: solute carrier family 35 member D3

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049742.1 Alternate UNSW_CanFamBas_1.0

    Range
    29357253..29360919
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038589786.1 → XP_038445714.1  solute carrier family 35 member D3

    Conserved Domains (1) summary
    COG5070
    Location:30 → 314
    VRG4; Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049222.1 Alternate UU_Cfam_GSD_1.0

    Range
    29656307..29659976
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038525581.1 → XP_038381509.1  solute carrier family 35 member D3

    UniProtKB/TrEMBL
    A0A8C0R638, A0A8C0RVH0, A0A8I3NE49, A0A8P0N3L4
    Conserved Domains (1) summary
    COG5070
    Location:30 → 314
    VRG4; Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006583.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    30308618..30312294
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003638771.5 → XP_003638819.1  solute carrier family 35 member D3

    UniProtKB/TrEMBL
    A0A8C0R638, A0A8C0RVH0, A0A8I3NE49, A0A8P0N3L4
    Conserved Domains (1) summary
    COG5070
    Location:30 → 314
    VRG4; Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Nucleotide Protein
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