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LYZL4 lysozyme like 4 [ Canis lupus familiaris (dog) ]

Gene ID: 100855480, updated on 17-Aug-2024

Summary

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Official Symbol
LYZL4provided by VGNC
Official Full Name
lysozyme like 4provided by VGNC
Primary source
VGNC:VGNC:42902
See related
Ensembl:ENSCAFG00845019314
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See LYZL4 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
10
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 23 NC_051827.1 (11814715..11832371, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 23 NC_006605.4 (11564493..11582132, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 23 NC_049244.1 (11763105..11780752, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 23 NC_049283.1 (11616455..11634094, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 23 NC_049764.1 (11758878..11776523, complement)

Chromosome 23 - NC_051827.1Genomic Context describing neighboring genes Neighboring gene negative elongation factor E-like Neighboring gene uncharacterized LOC102156522 Neighboring gene uncharacterized LOC119865352 Neighboring gene uncharacterized LOC119865353

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lysozyme activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fusion of sperm to egg plasma membrane involved in single fertilization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in acrosomal vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sperm flagellum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysozyme-like protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051827.1 Reference ROS_Cfam_1.0

    Range
    11814715..11832371 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038432007.1 → XP_038287935.1  lysozyme-like protein 4 isoform X3

    UniProtKB/TrEMBL
    A0A8C0NBL7, A0A8C0R7M3, A0A8C0Z4B8, A0A8I3NYL7
    Related
    ENSCAFP00845026669.1, ENSCAFT00845034067.1
    Conserved Domains (1) summary
    cd16897
    Location:21 → 143
    LYZ_C; C-type lysozyme

  2. XM_038432009.1 → XP_038287937.1  lysozyme-like protein 4 isoform X3

    UniProtKB/TrEMBL
    A0A8C0NBL7, A0A8C0R7M3, A0A8C0Z4B8, A0A8I3NYL7
    Conserved Domains (1) summary
    cd16897
    Location:21 → 143
    LYZ_C; C-type lysozyme

  3. XM_038432008.1 → XP_038287936.1  lysozyme-like protein 4 isoform X3

    UniProtKB/TrEMBL
    A0A8C0NBL7, A0A8C0R7M3, A0A8C0Z4B8, A0A8I3NYL7
    Conserved Domains (1) summary
    cd16897
    Location:21 → 143
    LYZ_C; C-type lysozyme

  4. XM_038432005.1 → XP_038287933.1  lysozyme-like protein 4 isoform X1

    Conserved Domains (1) summary
    cd16897
    Location:43 → 165
    LYZ_C; C-type lysozyme

  5. XM_038432006.1 → XP_038287934.1  lysozyme-like protein 4 isoform X2

    Conserved Domains (1) summary
    cd16897
    Location:69 → 175
    LYZ_C; C-type lysozyme

  6. XM_038432010.1 → XP_038287938.1  lysozyme-like protein 4 isoform X3

    UniProtKB/TrEMBL
    A0A8C0NBL7, A0A8C0R7M3, A0A8C0Z4B8, A0A8I3NYL7
    Conserved Domains (1) summary
    cd16897
    Location:21 → 143
    LYZ_C; C-type lysozyme

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049283.1 Alternate UMICH_Zoey_3.1

    Range
    11616455..11634094 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038507318.1 → XP_038363246.1  lysozyme-like protein 4 isoform X3

    Conserved Domains (1) summary
    cd16897
    Location:21 → 143
    LYZ_C; C-type lysozyme

  2. XM_038507316.1 → XP_038363244.1  lysozyme-like protein 4 isoform X4

    Conserved Domains (1) summary
    cd16897
    Location:49 → 171
    LYZ_C; C-type lysozyme

  3. XM_038507319.1 → XP_038363247.1  lysozyme-like protein 4 isoform X3

    Conserved Domains (1) summary
    cd16897
    Location:21 → 143
    LYZ_C; C-type lysozyme

  4. XM_038507315.1 → XP_038363243.1  lysozyme-like protein 4 isoform X1

    Conserved Domains (1) summary
    cd16897
    Location:43 → 165
    LYZ_C; C-type lysozyme

  5. XM_038507317.1 → XP_038363245.1  lysozyme-like protein 4 isoform X2

    Conserved Domains (1) summary
    cd16897
    Location:69 → 175
    LYZ_C; C-type lysozyme

  6. XM_038507320.1 → XP_038363248.1  lysozyme-like protein 4 isoform X3

    Conserved Domains (1) summary
    cd16897
    Location:21 → 143
    LYZ_C; C-type lysozyme

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049764.1 Alternate UNSW_CanFamBas_1.0

    Range
    11758878..11776523 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038634733.1 → XP_038490661.1  lysozyme-like protein 4 isoform X3

    Conserved Domains (1) summary
    cd16897
    Location:21 → 143
    LYZ_C; C-type lysozyme

  2. XM_038634731.1 → XP_038490659.1  lysozyme-like protein 4 isoform X5

    Conserved Domains (1) summary
    cd16897
    Location:49 → 171
    LYZ_C; C-type lysozyme

  3. XM_038634734.1 → XP_038490662.1  lysozyme-like protein 4 isoform X3

    Conserved Domains (1) summary
    cd16897
    Location:21 → 143
    LYZ_C; C-type lysozyme

  4. XM_038634730.1 → XP_038490658.1  lysozyme-like protein 4 isoform X1

    Conserved Domains (1) summary
    cd16897
    Location:43 → 165
    LYZ_C; C-type lysozyme

  5. XM_038634732.1 → XP_038490660.1  lysozyme-like protein 4 isoform X2

    Conserved Domains (1) summary
    cd16897
    Location:69 → 175
    LYZ_C; C-type lysozyme

  6. XM_038634735.1 → XP_038490663.1  lysozyme-like protein 4 isoform X3

    Conserved Domains (1) summary
    cd16897
    Location:21 → 143
    LYZ_C; C-type lysozyme

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049244.1 Alternate UU_Cfam_GSD_1.0

    Range
    11763105..11780752 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038570554.1 → XP_038426482.1  lysozyme-like protein 4 isoform X3

    UniProtKB/TrEMBL
    A0A8C0NBL7, A0A8C0R7M3, A0A8C0Z4B8, A0A8I3NYL7
    Conserved Domains (1) summary
    cd16897
    Location:21 → 143
    LYZ_C; C-type lysozyme

  2. XM_038570552.1 → XP_038426480.1  lysozyme-like protein 4 isoform X6

    Conserved Domains (1) summary
    cd16897
    Location:49 → 171
    LYZ_C; C-type lysozyme

  3. XM_038570555.1 → XP_038426483.1  lysozyme-like protein 4 isoform X3

    UniProtKB/TrEMBL
    A0A8C0NBL7, A0A8C0R7M3, A0A8C0Z4B8, A0A8I3NYL7
    Conserved Domains (1) summary
    cd16897
    Location:21 → 143
    LYZ_C; C-type lysozyme

  4. XM_038570551.1 → XP_038426479.1  lysozyme-like protein 4 isoform X1

    Conserved Domains (1) summary
    cd16897
    Location:43 → 165
    LYZ_C; C-type lysozyme

  5. XM_038570553.1 → XP_038426481.1  lysozyme-like protein 4 isoform X2

    Conserved Domains (1) summary
    cd16897
    Location:69 → 175
    LYZ_C; C-type lysozyme

  6. XM_038570556.1 → XP_038426484.1  lysozyme-like protein 4 isoform X3

    UniProtKB/TrEMBL
    A0A8C0NBL7, A0A8C0R7M3, A0A8C0Z4B8, A0A8I3NYL7
    Conserved Domains (1) summary
    cd16897
    Location:21 → 143
    LYZ_C; C-type lysozyme

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006605.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    11564493..11582132 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038457420.1 → XP_038313348.1  lysozyme-like protein 4 isoform X3

    UniProtKB/TrEMBL
    A0A8C0NBL7, A0A8C0R7M3, A0A8C0Z4B8, A0A8I3NYL7
    Conserved Domains (1) summary
    cd16897
    Location:21 → 143
    LYZ_C; C-type lysozyme

  2. XM_038457418.1 → XP_038313346.1  lysozyme-like protein 4 isoform X7

    Conserved Domains (1) summary
    cd16897
    Location:49 → 171
    LYZ_C; C-type lysozyme

  3. XM_038457421.1 → XP_038313349.1  lysozyme-like protein 4 isoform X3

    UniProtKB/TrEMBL
    A0A8C0NBL7, A0A8C0R7M3, A0A8C0Z4B8, A0A8I3NYL7
    Conserved Domains (1) summary
    cd16897
    Location:21 → 143
    LYZ_C; C-type lysozyme

  4. XM_038457417.1 → XP_038313345.1  lysozyme-like protein 4 isoform X1

    Conserved Domains (1) summary
    cd16897
    Location:43 → 165
    LYZ_C; C-type lysozyme

  5. XM_038457419.1 → XP_038313347.1  lysozyme-like protein 4 isoform X2

    Conserved Domains (1) summary
    cd16897
    Location:69 → 175
    LYZ_C; C-type lysozyme

  6. XM_038457422.1 → XP_038313350.1  lysozyme-like protein 4 isoform X3

    UniProtKB/TrEMBL
    A0A8C0NBL7, A0A8C0R7M3, A0A8C0Z4B8, A0A8I3NYL7
    Conserved Domains (1) summary
    cd16897
    Location:21 → 143
    LYZ_C; C-type lysozyme
Nucleotide Protein
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