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MIR5685 microRNA 5685 [ Homo sapiens (human) ]

Gene ID: 100847075, updated on 17-Sep-2024

Summary

Official Symbol
MIR5685provided by HGNC
Official Full Name
microRNA 5685provided by HGNC
Primary source
HGNC:HGNC:43543
See related
Ensembl:ENSG00000264056 miRBase:MI0019287; AllianceGenome:HGNC:43543
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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Genomic context

See MIR5685 in Genome Data Viewer
Location:
6p12.1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (53276993..53277071)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (53116751..53116829)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (53141791..53141869)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene high mobility group box 1 pseudogene 20 Neighboring gene uncharacterized LOC124901332 Neighboring gene ELOVL fatty acid elongase 5 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_92203 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24694 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr6:53169169-53169692 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24695 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24696 Neighboring gene Sharpr-MPRA regulatory region 4240 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24697 Neighboring gene ribosomal protein S16 pseudogene 5 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17289 Neighboring gene ribosomal protein L31 pseudogene 28

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_049866.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AL034374
    Related
    ENST00000579080.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    53276993..53277071
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    53116751..53116829
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)