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MIR5093 microRNA 5093 [ Homo sapiens (human) ]

Gene ID: 100847022, updated on 10-Oct-2023

Summary

Official Symbol
MIR5093provided by HGNC
Official Full Name
microRNA 5093provided by HGNC
Primary source
HGNC:HGNC:43474
See related
Ensembl:ENSG00000266307 miRBase:MI0017982; AllianceGenome:HGNC:43474
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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Genomic context

Location:
16q24.1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (85306226..85306325, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (91372382..91372481, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (85339832..85339931, complement)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene Gse1 coiled-coil protein Neighboring gene ReSE screen-validated silencer GRCh37_chr16:85330200-85330435 Neighboring gene Sharpr-MPRA regulatory region 9478 Neighboring gene long intergenic non-protein coding RNA 311 Neighboring gene cytochrome c oxidase subunit 6C pseudogene 16 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11270 Neighboring gene uncharacterized LOC101928502 Neighboring gene Sharpr-MPRA regulatory region 9835 Neighboring gene uncharacterized LOC107984830 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7804 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85350968-85351763 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85353355-85353865 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85353866-85354375 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85355657-85356187 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85355126-85355656 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85361388-85361956 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85361957-85362524 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85364231-85364798 Neighboring gene ReSE screen-validated silencer GRCh37_chr16:85380301-85380577 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85383235-85383873 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85387813-85388516 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85388517-85389218 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85389454-85389954 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85397928-85398554 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85398555-85399181 Neighboring gene ReSE screen-validated silencer GRCh37_chr16:85404333-85404558 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85406218-85406731 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85418551-85419116 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr16:85429395-85429960 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr16:85429961-85430526 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85436783-85437311 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85451929-85452546 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85453670-85454511 Neighboring gene Sharpr-MPRA regulatory region 8888 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85468128-85468788 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85470108-85470766 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85469448-85470107 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85474018-85474538 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85474539-85475058 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85477805-85478693 Neighboring gene uncharacterized LOC124903738 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7806 Neighboring gene OCT4-H3K4me1 hESC enhancer GRCh37_chr16:85485239-85485738 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85485752-85486252 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85491854-85492505 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr16:85493140-85493848 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85493849-85494555 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85494556-85495263

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_049816.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AC092275
    Related
    ENST00000583199.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

    Range
    85306226..85306325 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060940.1 Alternate T2T-CHM13v2.0

    Range
    91372382..91372481 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)