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LOC100843496 probable tRNA (guanine(26)-N(2))-dimethyltransferase 1 [ Brachypodium distachyon (stiff brome) ]

Gene ID: 100843496, updated on 23-Nov-2023

Summary

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Gene symbol
LOC100843496
Gene description
probable tRNA (guanine(26)-N(2))-dimethyltransferase 1
Locus tag
BRADI_1g57370v3
Gene type
protein coding
RefSeq status
MODEL
Organism
Brachypodium distachyon
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium
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Genomic context

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See LOC100843496 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
12
Annotation release Status Assembly Chr Location
103 current Brachypodium_distachyon_v3.0 (GCF_000005505.3) 1 NC_016131.3 (56391120..56395738, complement)
102 previous assembly Brachypodium_distachyon_v2.0 (GCF_000005505.2) 1 NC_016131.2 (56446788..56451561, complement)

Chromosome 1 - NC_016131.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100842923 Neighboring gene putative oxidoreductase C1F5.03c Neighboring gene Fanconi anemia group D2 protein Neighboring gene uncharacterized LOC100843802

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA N2-guanine methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable tRNA (guanine(26)-N(2))-dimethyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brachypodium distachyon Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Brachypodium_distachyon_v3.0 Primary Assembly

Genomic

  1. NC_016131.3 Reference Brachypodium_distachyon_v3.0 Primary Assembly

    Range
    56391120..56395738 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003557547.4 → XP_003557595.1  probable tRNA (guanine(26)-N(2))-dimethyltransferase 1

    UniProtKB/TrEMBL
    I1H3Q3
    Conserved Domains (1) summary
    cl17173
    Location:10 → 473
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
Nucleotide Protein Strain
Heading Accession and Version

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