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LOC100820889 anthocyanidin 5,3-O-glucosyltransferase [ Brachypodium distachyon (stiff brome) ]

Gene ID: 100820889, updated on 9-Nov-2023

Summary

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Gene symbol
LOC100820889
Gene description
anthocyanidin 5,3-O-glucosyltransferase
Locus tag
BRADI_2g19147v3
Gene type
protein coding
RefSeq status
MODEL
Organism
Brachypodium distachyon
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium
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Genomic context

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See LOC100820889 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
2
Annotation release Status Assembly Chr Location
103 current Brachypodium_distachyon_v3.0 (GCF_000005505.3) 2 NC_016132.3 (16882006..16884021, complement)
102 previous assembly Brachypodium_distachyon_v2.0 (GCF_000005505.2) 2 NC_016132.2 (16880722..16883347, complement)

Chromosome 2 - NC_016132.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104582608 Neighboring gene protein CHROMATIN REMODELING 24 Neighboring gene UDP-glycosyltransferase 13-like Neighboring gene anthocyanidin 5,3-O-glucosyltransferase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
anthocyanidin 5,3-O-glucosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brachypodium distachyon Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Brachypodium_distachyon_v3.0 Primary Assembly

Genomic

  1. NC_016132.3 Reference Brachypodium_distachyon_v3.0 Primary Assembly

    Range
    16882006..16884021 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003565967.3 → XP_003566015.1  anthocyanidin 5,3-O-glucosyltransferase

    UniProtKB/TrEMBL
    A0A0Q3G1I2
    Conserved Domains (1) summary
    cl10013
    Location:4 → 466
    Glycosyltransferase_GTB_type; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate ...
Nucleotide Protein Strain
Heading Accession and Version

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