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LOC100819161 acid beta-fructofuranosidase 1, vacuolar [ Glycine max (soybean) ]

Gene ID: 100819161, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100819161
Gene description
acid beta-fructofuranosidase 1, vacuolar
Locus tag
GLYMA_06G318500v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100819161 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
7
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 6 NC_038242.2 (50241281..50246863)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 6 NC_038242.1 (50710902..50716461)

Chromosome 6 - NC_038242.2Genomic Context describing neighboring genes Neighboring gene disease resistance protein SUMM2-like Neighboring gene trehalose-phosphate phosphatase A Neighboring gene putative disease resistance protein At3g14460 Neighboring gene protein DETOXIFICATION 14

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-fructofuranosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acid beta-fructofuranosidase 1, vacuolar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038242.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    50241281..50246863
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003526326.5 → XP_003526374.1  acid beta-fructofuranosidase 1, vacuolar

    UniProtKB/TrEMBL
    K7KYK6
    Conserved Domains (2) summary
    smart00640
    Location:122 → 592
    Glyco_32; Glycosyl hydrolases family 32
    pfam11837
    Location:19 → 113
    DUF3357; Domain of unknown function (DUF3357)
Nucleotide Protein
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