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LOC100817076 galacturonosyltransferase 8-like [ Glycine max (soybean) ]

Gene ID: 100817076, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100817076
Gene description
galacturonosyltransferase 8-like
Locus tag
GLYMA_08G348000v4
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100817076 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
3
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 8 NC_038244.2 (45612893..45616058, complement)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 8 NC_038244.1 (46238734..46241899, complement)

Chromosome 8 - NC_038244.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102663587 Neighboring gene microRNA MIR1516d Neighboring gene uncharacterized LOC102663802 Neighboring gene wound-induced basic protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galacturonosyltransferase 8-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001255683.3 → NP_001242612.2  galacturonosyltransferase 8-like

    Status: VALIDATED

    Source sequence(s)
    ACUP04003030, BF067404, BM177327, EV269271, FG987989, FK009128
    UniProtKB/TrEMBL
    C6TG57, I1KZ34
    Conserved Domains (1) summary
    PLN02523
    Location:2 → 555
    PLN02523; galacturonosyltransferase

RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038244.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    45612893..45616058 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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