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LOC100813136 hydroxyproline O-arabinosyltransferase 1 [ Glycine max (soybean) ]

Gene ID: 100813136, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100813136
Gene description
hydroxyproline O-arabinosyltransferase 1
Locus tag
GLYMA_14G112600v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100813136 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
8
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 14 NC_038250.2 (13425641..13428252)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 14 NC_038250.1 (13184009..13186653)

Chromosome 14 - NC_038250.2Genomic Context describing neighboring genes Neighboring gene homeobox protein knotted-1-like 3 Neighboring gene uncharacterized LOC102662202 Neighboring gene uncharacterized LOC100812602 Neighboring gene insulin-degrading enzyme-like 1, peroxisomal Neighboring gene probable pectin methyltransferase QUA2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hydroxyproline O-arabinosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038250.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    13425641..13428252
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003544555.5 → XP_003544603.1  hydroxyproline O-arabinosyltransferase 1

    See identical proteins and their annotated locations for XP_003544603.1

    UniProtKB/TrEMBL
    I1M9G4
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases