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LOC100813028 xylosyltransferase 2-like [ Glycine max (soybean) ]

Gene ID: 100813028, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100813028
Gene description
xylosyltransferase 2-like
Locus tag
GLYMA_18G149600v4
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100813028 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
4
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 18 NC_038254.2 (26886529..26890825, complement)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 18 NC_038254.1 (26866190..26870486, complement)

Chromosome 18 - NC_038254.2Genomic Context describing neighboring genes Neighboring gene uncharacterized protein At4g13200, chloroplastic Neighboring gene uncharacterized LOC121173989 Neighboring gene small nucleolar RNA R71 Neighboring gene sterol 3-beta-glucosyltransferase UGT80A2 Neighboring gene small nucleolar RNA R71

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xylosyltransferase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001255862.2 → NP_001242791.1  xylosyltransferase 2-like precursor

    See identical proteins and their annotated locations for NP_001242791.1

    Status: PROVISIONAL

    Source sequence(s)
    BT098820
    UniProtKB/TrEMBL
    C6TM69, I1N1T5
    Conserved Domains (1) summary
    pfam02485
    Location:52 → 312
    Branch; Core-2/I-Branching enzyme

RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038254.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    26886529..26890825 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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