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LOC100810421 beta-1,3-galactosyltransferase 7 [ Glycine max (soybean) ]

Gene ID: 100810421, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100810421
Gene description
beta-1,3-galactosyltransferase 7
Locus tag
GLYMA_06G108100v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100810421 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
11
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 6 NC_038242.2 (8656148..8661349)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 6 NC_038242.1 (8686188..8691398)

Chromosome 6 - NC_038242.2Genomic Context describing neighboring genes Neighboring gene serine hydroxymethyltransferase 7 Neighboring gene protein GrpE Neighboring gene vacuolar protein sorting-associated protein 9A Neighboring gene uncharacterized LOC106798924 Neighboring gene uncharacterized LOC100305500

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,3-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038242.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    8656148..8661349
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006581499.4 → XP_006581562.1  beta-1,3-galactosyltransferase 7 isoform X2

    Conserved Domains (1) summary
    PLN03193
    Location:9 → 397
    PLN03193; beta-1,3-galactosyltransferase; Provisional

  2. XM_003526557.5 → XP_003526605.1  beta-1,3-galactosyltransferase 7 isoform X3

    See identical proteins and their annotated locations for XP_003526605.1

    UniProtKB/TrEMBL
    I1KA36
    Conserved Domains (1) summary
    PLN03193
    Location:9 → 394
    PLN03193; beta-1,3-galactosyltransferase; Provisional

  3. XM_041016395.1 → XP_040872329.1  beta-1,3-galactosyltransferase 7 isoform X1

    Conserved Domains (1) summary
    PLN03193
    Location:93 → 420
    PLN03193; beta-1,3-galactosyltransferase; Provisional
Nucleotide Protein
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