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LOC100810004 probable endo-1,3(4)-beta-glucanase ARB_01444 [ Glycine max (soybean) ]

Gene ID: 100810004, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100810004
Gene description
probable endo-1,3(4)-beta-glucanase ARB_01444
Locus tag
GLYMA_18G267100v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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Location:
chromosome: 18
Exon count:
1
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 18 NC_038254.2 (55426988..55429543)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 18 NC_038254.1 (55151638..55154333)

Chromosome 18 - NC_038254.2Genomic Context describing neighboring genes Neighboring gene probable endo-1,3(4)-beta-glucanase ARB_01444 Neighboring gene LRR receptor-like serine/threonine-protein kinase RPK2 Neighboring gene uncharacterized LOC102670157 Neighboring gene ninja-family protein AFP3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable endo-1,3(4)-beta-glucanase ARB_01444
Names
putative endo-1,3(4)-beta-glucanase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038254.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    55426988..55429543
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003552523.5 → XP_003552571.1  probable endo-1,3(4)-beta-glucanase ARB_01444

    See identical proteins and their annotated locations for XP_003552571.1

    UniProtKB/TrEMBL
    I1N4K3
    Conserved Domains (2) summary
    pfam03639
    Location:30 → 298
    Glyco_hydro_81; Glycosyl hydrolase family 81
    pfam17652
    Location:304 → 652
    Glyco_hydro81C; Glycosyl hydrolase family 81 C-terminal domain
Nucleotide Protein
Heading Accession and Version

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