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LOC100809273 probable galacturonosyltransferase 15 [ Glycine max (soybean) ]

Gene ID: 100809273, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100809273
Gene description
probable galacturonosyltransferase 15
Locus tag
GLYMA_18G105900v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100809273 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
6
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 18 NC_038254.2 (11745394..11754085, complement)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 18 NC_038254.1 (11817117..11825813, complement)

Chromosome 18 - NC_038254.2Genomic Context describing neighboring genes Neighboring gene agamous-like MADS-box protein MADS1 Neighboring gene probable endochitinase Neighboring gene uncharacterized LOC106797119 Neighboring gene uncharacterized LOC121174006

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 15

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038254.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    11745394..11754085 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003551864.4 → XP_003551912.1  probable galacturonosyltransferase 15 isoform X1

    See identical proteins and their annotated locations for XP_003551912.1

    UniProtKB/TrEMBL
    I1KY26, K7MR54
    Conserved Domains (1) summary
    PLN02867
    Location:1 → 525
    PLN02867; Probable galacturonosyltransferase

  2. XM_041011936.1 → XP_040867870.1  probable galacturonosyltransferase 15 isoform X2

    UniProtKB/TrEMBL
    A0A0R0F8E5
Nucleotide Protein
Heading Accession and Version

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