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LOC100806522 cellulose synthase A catalytic subunit 8 [UDP-forming] [ Glycine max (soybean) ]

Gene ID: 100806522, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100806522
Gene description
cellulose synthase A catalytic subunit 8 [UDP-forming]
Locus tag
GLYMA_06G065000v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100806522 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
13
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 6 NC_038242.2 (4921261..4927586, complement)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 6 NC_038242.1 (4944172..4950506, complement)

Chromosome 6 - NC_038242.2Genomic Context describing neighboring genes Neighboring gene shaggy-related protein kinase eta Neighboring gene uncharacterized LOC106798913 Neighboring gene uncharacterized LOC100785860 Neighboring gene homeobox protein knotted-1-like 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cellulose synthase (UDP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellulose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type primary cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cellulose synthase A catalytic subunit 8 [UDP-forming]

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038242.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    4921261..4927586 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003526231.5 → XP_003526279.1  cellulose synthase A catalytic subunit 8 [UDP-forming]

    See identical proteins and their annotated locations for XP_003526279.1

    UniProtKB/TrEMBL
    I1K8R3
    Conserved Domains (1) summary
    PLN02195
    Location:1 → 975
    PLN02195; cellulose synthase A
Nucleotide Protein
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