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LOC100805344 sucrose synthase 7 [ Glycine max (soybean) ]

Gene ID: 100805344, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100805344
Gene description
sucrose synthase 7
Locus tag
GLYMA_09G167000v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100805344 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
15
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 9 NC_038245.2 (40017935..40023764, complement)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 9 NC_038245.1 (39103836..39109675, complement)

Chromosome 9 - NC_038245.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102660380 Neighboring gene uncharacterized protein At4g15970-like Neighboring gene protein argonaute 1 Neighboring gene uncharacterized LOC112997902

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sucrose synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sucrose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sucrose synthase 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038245.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    40017935..40023764 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003533249.5 → XP_003533297.1  sucrose synthase 7

    UniProtKB/TrEMBL
    I1L3X9, K7MJ04
    Conserved Domains (1) summary
    PLN00142
    Location:4 → 819
    PLN00142; sucrose synthase
Nucleotide Protein
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