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LOC100802999 probable xyloglucan galactosyltransferase GT14 [ Glycine max (soybean) ]

Gene ID: 100802999, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100802999
Gene description
probable xyloglucan galactosyltransferase GT14
Locus tag
GLYMA_08G259400v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100802999 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
1
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 8 NC_038244.2 (23516544..23518372)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 8 NC_038244.1 (23417995..23419796)

Chromosome 8 - NC_038244.2Genomic Context describing neighboring genes Neighboring gene chitinase-like protein 1 Neighboring gene uncharacterized LOC100527236 Neighboring gene probable aldo-keto reductase 2 Neighboring gene uncharacterized LOC100803530

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable xyloglucan galactosyltransferase GT14

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038244.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    23516544..23518372
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003530440.5 → XP_003530488.2  probable xyloglucan galactosyltransferase GT14

    UniProtKB/TrEMBL
    K7L8X8, K7MV94
    Conserved Domains (1) summary
    pfam03016
    Location:62 → 406
    Exostosin; Exostosin family
Nucleotide Protein
Heading Accession and Version

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