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LOC100799776 galactoside 2-alpha-L-fucosyltransferase [ Glycine max (soybean) ]

Gene ID: 100799776, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100799776
Gene description
galactoside 2-alpha-L-fucosyltransferase
Locus tag
GLYMA_13G370500v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100799776 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
5
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 13 NC_038249.2 (44951133..44954533, complement)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 13 NC_038249.1 (45599434..45602893, complement)

Chromosome 13 - NC_038249.2Genomic Context describing neighboring genes Neighboring gene ABC transporter C family member 13 Neighboring gene galactoside 2-alpha-L-fucosyltransferase Neighboring gene uncharacterized LOC100305567 Neighboring gene putative receptor-like protein kinase At1g80870

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactoside 2-alpha-L-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in xyloglucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactoside 2-alpha-L-fucosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038249.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    44951133..44954533 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006595125.4 → XP_006595188.1  galactoside 2-alpha-L-fucosyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A0R0H9P5, K7M413
    Conserved Domains (1) summary
    cl16914
    Location:97 → 525
    O-FucT_like; GDP-fucose protein O-fucosyltransferase and related proteins

  2. XM_003543657.5 → XP_003543705.1  galactoside 2-alpha-L-fucosyltransferase isoform X1

    See identical proteins and their annotated locations for XP_003543705.1

    UniProtKB/TrEMBL
    A0A0R0H9P5, I1M5Z1
    Conserved Domains (1) summary
    cl16914
    Location:97 → 530
    O-FucT_like; GDP-fucose protein O-fucosyltransferase and related proteins

RNA

  1. XR_005888065.1 RNA Sequence

  2. XR_005888067.1 RNA Sequence

  3. XR_005888066.1 RNA Sequence

  4. XR_417795.4 RNA Sequence

  5. XR_417798.4 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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