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LOC100795007 4-alpha-glucanotransferase, chloroplastic/amyloplastic [ Glycine max (soybean) ]

Gene ID: 100795007, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100795007
Gene description
4-alpha-glucanotransferase, chloroplastic/amyloplastic
Locus tag
GLYMA_06G146400v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100795007 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
16
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 6 NC_038242.2 (11898637..11903907)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 6 NC_038242.1 (11943578..11948939)

Chromosome 6 - NC_038242.2Genomic Context describing neighboring genes Neighboring gene toll/interleukin-1 receptor-like protein Neighboring gene protein MIZU-KUSSEI 1 Neighboring gene F-box/kelch-repeat protein SKIP6 Neighboring gene shikimate kinase 1, chloroplastic-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4-alpha-glucanotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
4-alpha-glucanotransferase, chloroplastic/amyloplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038242.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    11898637..11903907
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003526782.5 → XP_003526830.1  4-alpha-glucanotransferase, chloroplastic/amyloplastic

    UniProtKB/TrEMBL
    A0A0R0JQM8, I1KBB6
    Conserved Domains (1) summary
    PLN02635
    Location:44 → 568
    PLN02635; disproportionating enzyme

RNA

  1. XR_414701.4 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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