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LOC100794333 F-box protein GID2 [ Glycine max (soybean) ]

Gene ID: 100794333, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100794333
Gene description
F-box protein GID2
Locus tag
GLYMA_14G086600v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100794333 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
1
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 14 NC_038250.2 (7634040..7635124, complement)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 14 NC_038250.1 (7747202..7748198, complement)

Chromosome 14 - NC_038250.2Genomic Context describing neighboring genes Neighboring gene probable carbohydrate esterase At4g34215 Neighboring gene MYB transcription factor MYB81 Neighboring gene uncharacterized LOC121173485 Neighboring gene MFP1 attachment factor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in gibberellic acid mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of gibberellic acid mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box protein GID2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038250.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    7634040..7635124 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014766622.3 → XP_014622108.1  F-box protein GID2

    UniProtKB/TrEMBL
    I1M8R5
    Conserved Domains (1) summary
    pfam12937
    Location:31 → 68
    F-box-like
Nucleotide Protein
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