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LOC100791908 mitochondrial carnitine/acylcarnitine carrier-like protein-like [ Glycine max (soybean) ]

Gene ID: 100791908, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100791908
Gene description
mitochondrial carnitine/acylcarnitine carrier-like protein-like
Locus tag
GLYMA_01G097100v4
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100791908 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 1 NC_016088.4 (32338680..32342285, complement)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 1 NC_016088.3 (31751470..31755080, complement)

Chromosome 1 - NC_016088.4Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102667359 Neighboring gene abscisic acid receptor PYR1-like protein Neighboring gene protein SPT2 homolog Neighboring gene phosphoenolpyruvate carboxykinase (ATP) 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ornithine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Mitochondrial carnitine/acylcarnitine carrier-like protein-like; uncharacterized protein LOC100791908

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001253241.2 → NP_001240170.1  Mitochondrial carnitine/acylcarnitine carrier-like protein-like

    See identical proteins and their annotated locations for NP_001240170.1

    Status: PROVISIONAL

    Source sequence(s)
    BT094358
    UniProtKB/TrEMBL
    C6TA29
    Conserved Domains (1) summary
    pfam00153
    Location:206 → 297
    Mito_carr; Mitochondrial carrier protein

RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_016088.4 Reference Glycine_max_v4.0 Primary Assembly

    Range
    32338680..32342285 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006572799.3 → XP_006572862.1  uncharacterized protein LOC100791908 isoform X1

    See identical proteins and their annotated locations for XP_006572862.1

    UniProtKB/TrEMBL
    C6TA29
    Conserved Domains (1) summary
    pfam00153
    Location:206 → 297
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

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