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LOC100791645 glucomannan 4-beta-mannosyltransferase 2 [ Glycine max (soybean) ]

Gene ID: 100791645, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100791645
Gene description
glucomannan 4-beta-mannosyltransferase 2
Locus tag
GLYMA_12G084600v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100791645 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
9
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 12 NC_038248.2 (6808006..6813990)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 12 NC_038248.1 (6827438..6833428)

Chromosome 12 - NC_038248.2Genomic Context describing neighboring genes Neighboring gene AT-hook motif nuclear-localized protein 7 Neighboring gene GABA transporter 1 Neighboring gene uncharacterized protein At4g22758 Neighboring gene histone deacetylase HDT1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucomannan 4-beta-mannosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038248.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    6808006..6813990
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003539758.5 → XP_003539806.1  glucomannan 4-beta-mannosyltransferase 2

    See identical proteins and their annotated locations for XP_003539806.1

    UniProtKB/TrEMBL
    I1LRC1
    Conserved Domains (1) summary
    cd06437
    Location:97 → 333
    CESA_CaSu_A2; Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex
Nucleotide Protein
Heading Accession and Version

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