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LOC100789406 laccase-6 [ Glycine max (soybean) ]

Gene ID: 100789406, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100789406
Gene description
laccase-6
Locus tag
GLYMA_07G054200v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100789406 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
6
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 7 NC_038243.2 (4718345..4722088, complement)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 7 NC_038243.1 (4743964..4746639, complement)

Chromosome 7 - NC_038243.2Genomic Context describing neighboring genes Neighboring gene MYB-like transcription factor 4 Neighboring gene laccase-6 Neighboring gene uncharacterized LOC106799422 Neighboring gene adenosine kinase 2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydroquinone:oxygen oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lignin catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in apoplast IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
laccase-6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038243.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    4718345..4722088 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003529834.5 → XP_003529882.1  laccase-6

    UniProtKB/TrEMBL
    I1KHT9
    Conserved Domains (1) summary
    TIGR03389
    Location:33 → 572
    laccase; plant
Nucleotide Protein
Heading Accession and Version

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