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LOC100788761 glucomannan 4-beta-mannosyltransferase 2 [ Glycine max (soybean) ]

Gene ID: 100788761, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100788761
Gene description
glucomannan 4-beta-mannosyltransferase 2
Locus tag
GLYMA_13G319600v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100788761 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
9
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 13 NC_038249.2 (40768532..40774321, complement)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 13 NC_038249.1 (41398329..41403961, complement)

Chromosome 13 - NC_038249.2Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized LOC106795541 Neighboring gene transfer RNA leucine (anticodon UAA) Neighboring gene transfer RNA proline (anticodon AGG) Neighboring gene GABA transporter 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucomannan 4-beta-mannosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038249.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    40768532..40774321 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003551028.5 → XP_003551076.1  glucomannan 4-beta-mannosyltransferase 2

    See identical proteins and their annotated locations for XP_003551076.1

    UniProtKB/TrEMBL
    I1MS67
    Conserved Domains (1) summary
    cd06437
    Location:97 → 333
    CESA_CaSu_A2; Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex
Nucleotide Protein
Heading Accession and Version

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