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LOC100787923 mannan endo-1,4-beta-mannosidase 4 [ Glycine max (soybean) ]

Gene ID: 100787923, updated on 19-Jun-2024

Summary

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Gene symbol
LOC100787923
Gene description
mannan endo-1,4-beta-mannosidase 4
Locus tag
GLYMA_19G223000v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100787923 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
6
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 19 NC_038255.2 (48049826..48054806)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 19 NC_038255.1 (47525146..47530190)

Chromosome 19 - NC_038255.2Genomic Context describing neighboring genes Neighboring gene germin-like protein subfamily 2 member 2 Neighboring gene putative expansin-A17 Neighboring gene glucose-1-phosphate adenylyltransferase large subunit 1 Neighboring gene paladin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mannan endo-1,4-beta-mannosidase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038255.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    48049826..48054806
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003554539.5 → XP_003554587.1  mannan endo-1,4-beta-mannosidase 4

    UniProtKB/TrEMBL
    I1NBK5
    Conserved Domains (1) summary
    COG3934
    Location:49 → 403
    COG3934; Endo-1,4-beta-mannosidase [Carbohydrate transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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