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LOC100787801 GPI mannosyltransferase 2 [ Glycine max (soybean) ]

Gene ID: 100787801, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100787801
Gene description
GPI mannosyltransferase 2
Locus tag
GLYMA_07G221600v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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Location:
chromosome: 7
Exon count:
6
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 7 NC_038243.2 (40005926..40009919)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 7 NC_038243.1 (39680562..39684551)

Chromosome 7 - NC_038243.2Genomic Context describing neighboring genes Neighboring gene glycine cleavage system H protein 2-like Neighboring gene uncharacterized LOC100794501 Neighboring gene uncharacterized LOC121175206 Neighboring gene uncharacterized protein At4g19900-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycolipid mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of mannosyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038243.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    40005926..40009919
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006583860.4 → XP_006583923.1  GPI mannosyltransferase 2 isoform X1

    See identical proteins and their annotated locations for XP_006583923.1

    UniProtKB/TrEMBL
    K7L364
    Conserved Domains (1) summary
    cl21590
    Location:20 → 498
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  2. XM_006583861.4 → XP_006583924.1  GPI mannosyltransferase 2 isoform X2

    UniProtKB/TrEMBL
    I1KM86
    Conserved Domains (1) summary
    cl21590
    Location:20 → 497
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
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