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LOC100787744 probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 8 [ Glycine max (soybean) ]

Gene ID: 100787744, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100787744
Gene description
probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 8
Locus tag
GLYMA_04G180900v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100787744 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
6
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 4 NC_016091.4 (43486936..43494136, complement)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 4 NC_016091.3 (44665587..44672701, complement)

Chromosome 4 - NC_016091.4Genomic Context describing neighboring genes Neighboring gene stem-specific protein TSJT1 Neighboring gene uncharacterized LOC100787218 Neighboring gene spermidine synthase 2-like Neighboring gene probable cyclic nucleotide-gated ion channel 16

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose metabolism in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 8; probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_016091.4 Reference Glycine_max_v4.0 Primary Assembly

    Range
    43486936..43494136 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003523023.4 → XP_003523071.2  probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 isoform X2

    UniProtKB/TrEMBL
    K7KKV9
    Conserved Domains (3) summary
    cd03788
    Location:30 → 513
    GT1_TPS; Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a ...
    PLN02205
    Location:1 → 812
    PLN02205; alpha,alpha-trehalose-phosphate synthase [UDP-forming]
    pfam02358
    Location:564 → 798
    Trehalose_PPase; Trehalose-phosphatase

  2. XM_006578558.3 → XP_006578621.1  probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 8 isoform X1

    UniProtKB/TrEMBL
    K7KKV7
    Conserved Domains (1) summary
    PLN02205
    Location:1 → 842
    PLN02205; alpha,alpha-trehalose-phosphate synthase [UDP-forming]

  3. XM_014774778.3 → XP_014630264.1  probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 8 isoform X1

    UniProtKB/TrEMBL
    K7KKV7
    Conserved Domains (1) summary
    PLN02205
    Location:1 → 842
    PLN02205; alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Nucleotide Protein
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