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LOC100787607 mitochondrial arginine transporter BAC1 [ Glycine max (soybean) ]

Gene ID: 100787607, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100787607
Gene description
mitochondrial arginine transporter BAC1
Locus tag
GLYMA_13G177267v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100787607 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
10
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 13 NC_038249.2 (28544379..28550083)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 13 NC_038249.1 (29123030..29129460)

Chromosome 13 - NC_038249.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121173312 Neighboring gene putative uncharacterized protein YGR160W Neighboring gene uncharacterized LOC100527199 Neighboring gene dof zinc finger protein DOF1.4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ornithine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial arginine transporter BAC1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038249.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    28544379..28550083
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003541480.5 → XP_003541528.1  mitochondrial arginine transporter BAC1

    See identical proteins and their annotated locations for XP_003541528.1

    UniProtKB/TrEMBL
    A0A0R0GPW5
    Conserved Domains (1) summary
    pfam00153
    Location:9 → 98
    Mito_carr; Mitochondrial carrier protein

RNA

  1. XR_001384158.3 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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