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LOC100787332 mitochondrial carnitine/acylcarnitine carrier-like protein [ Glycine max (soybean) ]

Gene ID: 100787332, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100787332
Gene description
mitochondrial carnitine/acylcarnitine carrier-like protein
Locus tag
GLYMA_09G203900v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100787332 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
4
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 9 NC_038245.2 (43708682..43712158)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 9 NC_038245.1 (42819421..42822923)

Chromosome 9 - NC_038245.2Genomic Context describing neighboring genes Neighboring gene probable starch synthase 4, chloroplastic/amyloplastic Neighboring gene probable sphingolipid transporter spinster homolog 2 Neighboring gene uncharacterized LOC102669690 Neighboring gene abscisic acid receptor PYR1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ornithine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038245.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    43708682..43712158
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014762304.2 → XP_014617790.1  mitochondrial carnitine/acylcarnitine carrier-like protein isoform X2

    UniProtKB/TrEMBL
    C6TE24
    Conserved Domains (1) summary
    pfam00153
    Location:184 → 270
    Mito_carr; Mitochondrial carrier protein

  2. XM_006587528.3 → XP_006587591.1  mitochondrial carnitine/acylcarnitine carrier-like protein isoform X1

    UniProtKB/TrEMBL
    C6TE24, I1L4W8
    Conserved Domains (1) summary
    pfam00153
    Location:211 → 297
    Mito_carr; Mitochondrial carrier protein

  3. XM_041005073.1 → XP_040861007.1  mitochondrial carnitine/acylcarnitine carrier-like protein isoform X1

    UniProtKB/TrEMBL
    C6TE24, I1L4W8
    Conserved Domains (1) summary
    pfam00153
    Location:211 → 297
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
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