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LOC100784433 protein HOTHEAD [ Glycine max (soybean) ]

Gene ID: 100784433, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100784433
Gene description
protein HOTHEAD
Locus tag
GLYMA_13G350300v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100784433 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
6
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 13 NC_038249.2 (43353494..43360007, complement)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 13 NC_038249.1 (43973495..43980009, complement)

Chromosome 13 - NC_038249.2Genomic Context describing neighboring genes Neighboring gene U5 spliceosomal RNA Neighboring gene uncharacterized LOC102663233 Neighboring gene U4 spliceosomal RNA Neighboring gene protein ROOT HAIR DEFECTIVE 3 homolog 1 Neighboring gene WD-40 repeat-containing protein MSI4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on CH-OH group of donors IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein HOTHEAD

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038249.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    43353494..43360007 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003543545.4 → XP_003543593.1  protein HOTHEAD

    See identical proteins and their annotated locations for XP_003543593.1

    UniProtKB/TrEMBL
    I1M5C4
    Conserved Domains (1) summary
    PLN02785
    Location:20 → 585
    PLN02785; Protein HOTHEAD
Nucleotide Protein
Heading Accession and Version

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