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LOC100778448 sterol 3-beta-glucosyltransferase UGT80B1 [ Glycine max (soybean) ]

Gene ID: 100778448, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100778448
Gene description
sterol 3-beta-glucosyltransferase UGT80B1
Locus tag
GLYMA_10G224000v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100778448 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
14
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 10 NC_038246.2 (45554506..45563807)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 10 NC_038246.1 (45479445..45488641)

Chromosome 10 - NC_038246.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100808387 Neighboring gene G-box-binding factor 4 Neighboring gene UPF0496 protein At1g20180 Neighboring gene uncharacterized LOC100809466 Neighboring gene thioredoxin Y1-like protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sterol 3-beta-glucosyltransferase UGT80B1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038246.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    45554506..45563807
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003535518.5 → XP_003535566.2  sterol 3-beta-glucosyltransferase UGT80B1

    UniProtKB/TrEMBL
    K7LKW1
    Conserved Domains (1) summary
    cd03784
    Location:172 → 586
    GT1_Gtf-like; UDP-glycosyltransferases and similar proteins
Nucleotide Protein
Heading Accession and Version

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