U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC100778199 rhamnogalacturonan I rhamnosyltransferase 1 [ Glycine max (soybean) ]

Gene ID: 100778199, updated on 7-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC100778199
Gene description
rhamnogalacturonan I rhamnosyltransferase 1
Locus tag
GLYMA_08G252700v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 8
Exon count:
8
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 8 NC_038244.2 (22272089..22275710)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 8 NC_038244.1 (22204102..22207718)

Chromosome 8 - NC_038244.2Genomic Context describing neighboring genes Neighboring gene protein ROOT INITIATION DEFECTIVE 3 Neighboring gene auxin transport protein BIG-like Neighboring gene transcription factor BIM3 Neighboring gene O-fucosyltransferase 27

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
rhamnogalacturonan I rhamnosyltransferase 1
Names
O-fucosyltransferase 34

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038244.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    22272089..22275710
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003530408.5 → XP_003530456.1  rhamnogalacturonan I rhamnosyltransferase 1

    UniProtKB/TrEMBL
    I1KWK9
    Conserved Domains (1) summary
    cd11299
    Location:100 → 425
    O-FucT_plant; GDP-fucose protein O-fucosyltransferase, plant specific subfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases