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Acsl5 acyl-CoA synthetase long chain family member 5 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100773264, updated on 8-Mar-2024

Summary

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Gene symbol
Acsl5
Gene description
acyl-CoA synthetase long chain family member 5
See related
Ensembl:ENSCGRG00015017440
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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See Acsl5 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
22
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003615346.1 (20593..70554)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 3 NC_048596.1 (6213084..6262617, complement)

NW_003615346.1Genomic Context describing neighboring genes Neighboring gene zinc finger DHHC-type palmitoyltransferase 6 Neighboring gene vesicle transport through interaction with t-SNAREs 1A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arachidonate-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
long-chain-fatty-acid--CoA ligase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003615346.1 Reference CriGri_1.0 Primary Assembly

    Range
    20593..70554
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007652550.4 → XP_007650740.1  long-chain-fatty-acid--CoA ligase 5

    See identical proteins and their annotated locations for XP_007650740.1

    UniProtKB/TrEMBL
    A0A8C2MK35
    Conserved Domains (2) summary
    PLN02736
    Location:71 → 681
    PLN02736; long-chain acyl-CoA synthetase
    cd05927
    Location:101 → 678
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048596.1 Alternate CriGri-PICRH-1.0

    Range
    6213084..6262617 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027406994.2 → XP_027262795.1  long-chain-fatty-acid--CoA ligase 5

    UniProtKB/TrEMBL
    A0A8C2MK35
    Related
    ENSCGRP00015022967.1, ENSCGRT00015028172.2
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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