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Slc30a4 solute carrier family 30 member 4 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100772645, updated on 8-Mar-2024

Summary

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Gene symbol
Slc30a4
Gene description
solute carrier family 30 member 4
Locus tag
I79_011891
See related
Ensembl:ENSCGRG00015018405
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See Slc30a4 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
8
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614086.1 (944768..970817)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 6 NC_048599.1 (55820530..55844757)

NW_003614086.1Genomic Context describing neighboring genes Neighboring gene sulfide quinone oxidoreductase Neighboring gene biogenesis of lysosomal organelles complex 1 subunit 6 Neighboring gene chromosome unknown C15orf48 homolog Neighboring gene microRNA mir-147 Neighboring gene AFG2 AAA ATPase homolog B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in response to zinc ion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in zinc ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc transporter 4
Names
Zinc transporter 4
solute carrier family 30 (zinc transporter), member 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614086.1 Reference CriGri_1.0 Primary Assembly

    Range
    944768..970817
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035457337.1 → XP_035313228.1  zinc transporter 4 isoform X1

    UniProtKB/TrEMBL
    A0A8C2M6W3, A0A9J7H320
    Conserved Domains (1) summary
    TIGR01297
    Location:123 → 427
    CDF; cation diffusion facilitator family transporter

  2. XM_035457338.1 → XP_035313229.1  zinc transporter 4 isoform X2

    UniProtKB/TrEMBL
    A0A8C2M4I9, A0A8C2M6W3
    Conserved Domains (1) summary
    TIGR01297
    Location:123 → 414
    CDF; cation diffusion facilitator family transporter

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048599.1 Alternate CriGri-PICRH-1.0

    Range
    55820530..55844757
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035446158.1 → XP_035302049.1  zinc transporter 4 isoform X3

    UniProtKB/TrEMBL
    A0A8C2M6W3, A0A9J7H320
    Related
    ENSCGRP00015054056.1, ENSCGRT00015048577.1
    Conserved Domains (1) summary
    TIGR01297
    Location:123 → 427
    CDF; cation diffusion facilitator family transporter

  2. XM_027421985.2 → XP_027277786.1  zinc transporter 4 isoform X4

    UniProtKB/TrEMBL
    A0A8C2M4I9, A0A8C2M6W3
    Related
    ENSCGRP00015024189.1, ENSCGRT00015029679.2
    Conserved Domains (1) summary
    TIGR01297
    Location:123 → 414
    CDF; cation diffusion facilitator family transporter
Nucleotide Protein Strain
Heading Accession and Version

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