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Gal3st4 galactose-3-O-sulfotransferase 4 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100771720, updated on 8-Mar-2024

Summary

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Gene symbol
Gal3st4
Gene description
galactose-3-O-sulfotransferase 4
See related
Ensembl:ENSCGRG00015038550
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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See Gal3st4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614875.1 (330614..341676, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) Unplaced Scaffold NW_023277414.1 (9075..20336, complement)

NW_003614875.1Genomic Context describing neighboring genes Neighboring gene late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 Neighboring gene trafficking protein particle complex subunit 14 Neighboring gene uncharacterized LOC103164270 Neighboring gene glypican 2 Neighboring gene eukaryotic translation elongation factor 1 epsilon-1-like Neighboring gene STAG3 cohesin complex component

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylceramide sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactose-3-O-sulfotransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614875.1 Reference CriGri_1.0 Primary Assembly

    Range
    330614..341676 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035461180.1 → XP_035317071.1  galactose-3-O-sulfotransferase 4 isoform X2

    UniProtKB/TrEMBL
    A0A061I505, A0A8C2QPB5
    Conserved Domains (1) summary
    cl22970
    Location:8 → 453
    Sulfotransfer_2; Sulfotransferase family

  2. XM_035461179.1 → XP_035317070.1  galactose-3-O-sulfotransferase 4 isoform X1

    UniProtKB/TrEMBL
    A0A061I505, A0A8C2MZR9
    Conserved Domains (1) summary
    cl22970
    Location:1 → 458
    Sulfotransfer_2; Sulfotransferase family

Alternate CriGri-PICRH-1.0

Genomic

  1. NW_023277414.1 Alternate CriGri-PICRH-1.0

    Range
    9075..20336 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035453915.1 → XP_035309806.1  galactose-3-O-sulfotransferase 4 isoform X2

    UniProtKB/TrEMBL
    A0A061I505, A0A8C2QPB5
    Conserved Domains (1) summary
    cl22970
    Location:8 → 453
    Sulfotransfer_2; Sulfotransferase family

  2. XM_035453914.1 → XP_035309805.1  galactose-3-O-sulfotransferase 4 isoform X1

    UniProtKB/TrEMBL
    A0A061I505, A0A8C2MZR9
    Related
    ENSCGRP00015058957.1, ENSCGRT00015081627.1
    Conserved Domains (1) summary
    cl22970
    Location:1 → 458
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein Strain
Heading Accession and Version

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