U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Extl1 exostosin like glycosyltransferase 1 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100770000, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Extl1
Gene description
exostosin like glycosyltransferase 1
See related
Ensembl:ENSCGRG00015018200
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Extl1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
11
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614761.1 (376389..393797, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 2 NC_048595.1 (18924545..18942109)

NW_003614761.1Genomic Context describing neighboring genes Neighboring gene tripartite motif containing 63 Neighboring gene solute carrier family 30 member 2 Neighboring gene platelet activating factor acetylhydrolase 2 Neighboring gene stathmin 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
exostosin-like 1
Names
Exostosin-like 1
exostoses (multiple)-like 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614761.1 Reference CriGri_1.0 Primary Assembly

    Range
    376389..393797 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007650369.3 → XP_007648559.1  exostosin-like 1 isoform X2

    See identical proteins and their annotated locations for XP_007648559.1

    UniProtKB/TrEMBL
    A0A061ID49, G3I3E6
    Conserved Domains (2) summary
    pfam03016
    Location:107 → 283
    Exostosin; Exostosin family
    pfam09258
    Location:375 → 607
    Glyco_transf_64; Glycosyl transferase family 64 domain

  2. XM_003509739.4 → XP_003509787.1  exostosin-like 1 isoform X1

    UniProtKB/TrEMBL
    A0A061IE50, A0A8C2LAA2
    Conserved Domains (2) summary
    pfam03016
    Location:107 → 325
    Exostosin; Exostosin family
    pfam09258
    Location:411 → 643
    Glyco_transf_64; Glycosyl transferase family 64 domain

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048595.1 Alternate CriGri-PICRH-1.0

    Range
    18924545..18942109
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027399635.2 → XP_027255436.1  exostosin-like 1 isoform X2

    UniProtKB/TrEMBL
    A0A061ID49, A0A9J7JC33
    Related
    ENSCGRP00015023946.1, ENSCGRT00015029372.2

  2. XM_027399634.2 → XP_027255435.1  exostosin-like 1 isoform X1

    UniProtKB/TrEMBL
    A0A061IE50, A0A9J7FAR1
    Related
    ENSCGRP00015023923.1, ENSCGRT00015029329.2
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.