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LOC100768787 centrosomal protein of 104 kDa [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100768787, updated on 19-Dec-2023

Summary

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Gene symbol
LOC100768787
Gene description
centrosomal protein of 104 kDa
See related
Ensembl:ENSCGRG00015011969
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See LOC100768787 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
18
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003616343.1 (1376..6909)
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003617576.1 (31215..58632)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 2 NC_048595.1 (2311728..2350007, complement)

NW_003617576.1Genomic Context describing neighboring genes Neighboring gene chromosome unknown C1orf174 homolog Neighboring gene DNA fragmentation factor subunit beta

NW_003616343.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat containing 47 Neighboring gene small integral membrane protein 1 (Vel blood group)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
centrosomal protein of 104 kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003616343.1 Reference CriGri_1.0 Primary Assembly

    Range
    1376..6909
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003514096.4 → XP_003514144.3  centrosomal protein of 104 kDa isoform X2

    UniProtKB/TrEMBL
    A0A8C2MN64, A0A9J7FE24
    Conserved Domains (1) summary
    sd00044
    Location:435 → 472
    HEAT; HEAT repeat [structural motif]

RNA

  1. XR_004767629.1 RNA Sequence

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003617576.1 Reference CriGri_1.0 Primary Assembly

    Range
    31215..58632
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003515230.5 → XP_003515278.1  centrosomal protein of 104 kDa isoform X1

    See identical proteins and their annotated locations for XP_003515278.1

    UniProtKB/TrEMBL
    A0A8C2MN64, G3ILD7
    Conserved Domains (1) summary
    sd00044
    Location:435 → 472
    HEAT; HEAT repeat [structural motif]

  2. XM_027386034.2 → XP_027241835.1  centrosomal protein of 104 kDa isoform X1

    UniProtKB/TrEMBL
    A0A8C2MN64, G3ILD7

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048595.1 Alternate CriGri-PICRH-1.0

    Range
    2311728..2350007 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027398463.2 → XP_027254264.1  centrosomal protein of 104 kDa isoform X3

    UniProtKB/TrEMBL
    A0A8C2MN64, A0A9J7FE24
    Related
    ENSCGRP00015055257.1, ENSCGRT00015049345.1
    Conserved Domains (1) summary
    sd00044
    Location:435 → 472
    HEAT; HEAT repeat [structural motif]

  2. XM_027398462.2 → XP_027254263.1  centrosomal protein of 104 kDa isoform X3

    UniProtKB/TrEMBL
    A0A8C2MN64, A0A9J7FE24
    Related
    ENSCGRP00015015612.2, ENSCGRT00015019153.2
    Conserved Domains (1) summary
    sd00044
    Location:435 → 472
    HEAT; HEAT repeat [structural motif]

RNA

  1. XR_004768081.1 RNA Sequence

  2. XR_004768082.1 RNA Sequence

Nucleotide Protein Strain
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