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Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100762397, updated on 8-Mar-2024

Summary

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Gene symbol
Lfng
Gene description
LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
See related
Ensembl:ENSCGRG00015012999
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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See Lfng in Genome Data Viewer
Location:
chromosome: 4
Exon count:
8
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613618.1 (3195948..3204211, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 4 NC_048597.1 (77213427..77221617)

NW_003613618.1Genomic Context describing neighboring genes Neighboring gene IQ motif containing E Neighboring gene tweety family member 3 Neighboring gene uncharacterized LOC118238806 Neighboring gene galectin-related inter-fiber protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pattern specification process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
Names
Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613618.1 Reference CriGri_1.0 Primary Assembly

    Range
    3195948..3204211 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003496296.5 → XP_003496344.1  beta-1,3-N-acetylglucosaminyltransferase lunatic fringe

    See identical proteins and their annotated locations for XP_003496344.1

    UniProtKB/TrEMBL
    G3GVF0
    Conserved Domains (1) summary
    pfam02434
    Location:109 → 357
    Fringe; Fringe-like

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048597.1 Alternate CriGri-PICRH-1.0

    Range
    77213427..77221617
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027413513.2 → XP_027269314.1  beta-1,3-N-acetylglucosaminyltransferase lunatic fringe

    UniProtKB/TrEMBL
    A0A3L7HQC4
    Related
    ENSCGRP00015016919.1, ENSCGRT00015020749.2
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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