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Mgat5 alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100760162, updated on 8-Mar-2024

Summary

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Gene symbol
Mgat5
Gene description
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase
See related
Ensembl:ENSCGRG00015007627
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Also known as
GNT-V
Orthologs
human mouse all
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Genomic context

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See Mgat5 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
19
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613656.1 (2643597..2936301)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 5 NC_048598.1 (61306441..61598573, complement)

NW_003613656.1Genomic Context describing neighboring genes Neighboring gene peptidyl-prolyl cis-trans isomerase A-like Neighboring gene tudor and KH domain-containing protein-like Neighboring gene small nucleolar RNA U6-53/MBII-28 Neighboring gene transmembrane protein 163 Neighboring gene transfer RNA aspartic acid (anticodon GUC)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A point mutation causes mistargeting of Golgi GlcNAc-TV in the Lec4A Chinese hamster ovary glycosylation mutant. Weinstein J, et al. J Biol Chem, 1996 Nov 1. PMID 8910328
  2. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A
Names
Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A
Alpha-mannoside beta-1,6-N-acetylglucosaminyltransferase
GlcNAc-T V
Mannoside acetylglucosaminyltransferase 5
N-acetylglucosaminyl-transferase V
mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613656.1 Reference CriGri_1.0 Primary Assembly

    Range
    2643597..2936301
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007614836.4 → XP_007613026.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

    See identical proteins and their annotated locations for XP_007613026.1

    UniProtKB/Swiss-Prot
    P70100, P70101, P97259
    UniProtKB/TrEMBL
    G3GZF3
    Conserved Domains (2) summary
    pfam15024
    Location:171 → 725
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:3 → 137
    DUF4525; Domain of unknown function (DUF4525)

  2. XM_016966722.3 → XP_016822211.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

    UniProtKB/Swiss-Prot
    P70100, P70101, P97259
    UniProtKB/TrEMBL
    G3GZF3
    Conserved Domains (2) summary
    pfam15024
    Location:171 → 725
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:3 → 137
    DUF4525; Domain of unknown function (DUF4525)

  3. XM_016966727.3 → XP_016822216.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

    UniProtKB/Swiss-Prot
    P70100, P70101, P97259
    UniProtKB/TrEMBL
    G3GZF3
    Conserved Domains (2) summary
    pfam15024
    Location:171 → 725
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:3 → 137
    DUF4525; Domain of unknown function (DUF4525)

  4. XM_016966725.3 → XP_016822214.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

    UniProtKB/Swiss-Prot
    P70100, P70101, P97259
    UniProtKB/TrEMBL
    G3GZF3
    Conserved Domains (2) summary
    pfam15024
    Location:171 → 725
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:3 → 137
    DUF4525; Domain of unknown function (DUF4525)

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048598.1 Alternate CriGri-PICRH-1.0

    Range
    61306441..61598573 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027417769.2 → XP_027273570.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

    UniProtKB/Swiss-Prot
    P70100, P70101, P97259
    UniProtKB/TrEMBL
    G3GZF3
    Related
    ENSCGRP00015009983.1, ENSCGRT00015012284.2

  2. XM_027417768.2 → XP_027273569.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

    UniProtKB/Swiss-Prot
    P70100, P70101, P97259
    UniProtKB/TrEMBL
    G3GZF3

  3. XM_027417771.2 → XP_027273572.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

    UniProtKB/Swiss-Prot
    P70100, P70101, P97259
    UniProtKB/TrEMBL
    G3GZF3

  4. XM_027417770.2 → XP_027273571.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

    UniProtKB/Swiss-Prot
    P70100, P70101, P97259
    UniProtKB/TrEMBL
    G3GZF3
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P97259.1 GenPept UniProtKB/Swiss-Prot:P97259

Gene LinkOut

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