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St6galnac4 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100759065, updated on 8-Mar-2024

Summary

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Gene symbol
St6galnac4
Gene description
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4
See related
Ensembl:ENSCGRG00015006046
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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See St6galnac4 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
6
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614338.1 (173819..183818)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 6 NC_048599.1 (144307349..144317363)

NW_003614338.1Genomic Context describing neighboring genes Neighboring gene dolichyl-phosphate mannosyltransferase subunit 2, regulatory Neighboring gene phosphatidylinositol-4-phosphate 5-kinase like 1 Neighboring gene ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 Neighboring gene adenylate kinase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ganglioside biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase
Names
Alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1, 3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614338.1 Reference CriGri_1.0 Primary Assembly

    Range
    173819..183818
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007647725.4 → XP_007645915.1  alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase isoform X1

    See identical proteins and their annotated locations for XP_007645915.1

    UniProtKB/TrEMBL
    G3HV02
    Conserved Domains (1) summary
    pfam00777
    Location:59 → 289
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_035458928.1 → XP_035314819.1  alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase isoform X3

    UniProtKB/TrEMBL
    A0A9J7KAM2
    Conserved Domains (1) summary
    pfam00777
    Location:11 → 227
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  3. XM_007647726.4 → XP_007645916.1  alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase isoform X1

    See identical proteins and their annotated locations for XP_007645916.1

    UniProtKB/TrEMBL
    G3HV02
    Conserved Domains (1) summary
    pfam00777
    Location:59 → 289
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  4. XM_007647727.4 → XP_007645917.1  alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase isoform X2

    See identical proteins and their annotated locations for XP_007645917.1

    UniProtKB/TrEMBL
    A0A9J7JTE9
    Conserved Domains (1) summary
    pfam00777
    Location:59 → 149
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048599.1 Alternate CriGri-PICRH-1.0

    Range
    144307349..144317363
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027423797.2 → XP_027279598.1  alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase isoform X1

    UniProtKB/TrEMBL
    G3HV02

  2. XM_035446546.1 → XP_035302437.1  alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase isoform X3

    UniProtKB/TrEMBL
    A0A9J7KAM2
    Conserved Domains (1) summary
    pfam00777
    Location:11 → 227
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  3. XM_027423798.2 → XP_027279599.1  alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase isoform X1

    UniProtKB/TrEMBL
    G3HV02
    Related
    ENSCGRP00015007733.1, ENSCGRT00015009537.2

  4. XM_027423799.2 → XP_027279600.1  alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A9J7JTE9
Nucleotide Protein Strain
Heading Accession and Version

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