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B3gnt5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100757919, updated on 2-May-2024

Summary

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Gene symbol
B3gnt5
Gene description
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
See related
Ensembl:ENSCGRG00015003079
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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See B3gnt5 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
1
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614764.1 (106887..108020)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 4 NC_048597.1 (68768301..68769434, complement)

NW_003614764.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor 2L13 Neighboring gene lysosomal associated membrane protein 3 Neighboring gene 60S ribosomal protein L7a-like Neighboring gene kelch like family member 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in brain development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614764.1 Reference CriGri_1.0 Primary Assembly

    Range
    106887..108020
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003509780.3 → XP_003509828.3  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

    UniProtKB/TrEMBL
    A0A061I6E8, A0A8C2LW08
    Conserved Domains (1) summary
    cl21608
    Location:101 → 298
    Galactosyl_T; Galactosyltransferase

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048597.1 Alternate CriGri-PICRH-1.0

    Range
    68768301..68769434 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035443587.1 → XP_035299478.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

    UniProtKB/TrEMBL
    A0A061I6E8, A0A8C2LW08
    Related
    ENSCGRP00015003891.1, ENSCGRT00015004818.2
    Conserved Domains (1) summary
    cl21608
    Location:101 → 298
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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