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Slc26a4 solute carrier family 26 member 4 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100757917, updated on 18-Sep-2024

Summary

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Gene symbol
Slc26a4
Gene description
solute carrier family 26 member 4
See related
Ensembl:ENSCGRG00015004989
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See Slc26a4 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
21
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614696.1 (26902..74465)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 5 NC_048598.1 (169032702..169079710, complement)

NW_003614696.1Genomic Context describing neighboring genes Neighboring gene Cbl proto-oncogene like 1 Neighboring gene solute carrier family 26 member 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables bicarbonate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chloride transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxalate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables secondary active sulfate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pendrin
Names
solute carrier family 26 (anion exchanger), member 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614696.1 Reference CriGri_1.0 Primary Assembly

    Range
    26902..74465
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027441396.2 → XP_027297197.2  pendrin isoform X1

    UniProtKB/TrEMBL
    A0A061I4Q5
    Conserved Domains (1) summary
    TIGR00815
    Location:131 → 786
    sulP; high affinity sulphate transporter 1

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048598.1 Alternate CriGri-PICRH-1.0

    Range
    169032702..169079710 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035445882.1 → XP_035301773.1  pendrin isoform X2

    UniProtKB/TrEMBL
    A0A061I4Q5, A0A9J7JZ30
    Related
    ENSCGRP00015006438.1, ENSCGRT00015007921.2
    Conserved Domains (1) summary
    TIGR00815
    Location:79 → 734
    sulP; high affinity sulphate transporter 1
Nucleotide Protein Strain
Heading Accession and Version

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