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Smap1 small ArfGAP 1 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100756395, updated on 19-Jun-2024

Summary

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Gene symbol
Smap1
Gene description
small ArfGAP 1
Locus tag
I79_001300
See related
Ensembl:ENSCGRG00015022228
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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See Smap1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
10
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613608.1 (2967090..3017291)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276807.1 (22334483..22415253)

NW_003613608.1Genomic Context describing neighboring genes Neighboring gene phosphoglycerate mutase 1-like Neighboring gene succinate dehydrogenase complex assembly factor 4 Neighboring gene beta-1,3-glucuronyltransferase 2 Neighboring gene opioid growth factor receptor like 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of clathrin-dependent endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
stromal membrane-associated protein 1
Names
Stromal membrane-associated protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613608.1 Reference CriGri_1.0 Primary Assembly

    Range
    2967090..3017291
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027438823.2 → XP_027294624.1  stromal membrane-associated protein 1 isoform X1

  2. XM_007645827.4 → XP_007644017.1  stromal membrane-associated protein 1 isoform X2

    See identical proteins and their annotated locations for XP_007644017.1

    UniProtKB/TrEMBL
    G3GUE3

Alternate CriGri-PICRH-1.0

Genomic

  1. NW_023276807.1 Alternate CriGri-PICRH-1.0

    Range
    22334483..22415253
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027392808.2 → XP_027248609.1  stromal membrane-associated protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A9J7F6H1
    Related
    ENSCGRP00015059356.1, ENSCGRT00015076245.1

  2. XM_027392807.2 → XP_027248608.1  stromal membrane-associated protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A8C2MVG9
    Related
    ENSCGRP00015029436.1, ENSCGRT00015036029.2
Nucleotide Protein Strain
Heading Accession and Version

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