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Thap11 THAP domain containing 11 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100753517, updated on 8-Mar-2024

Summary

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Gene symbol
Thap11
Gene description
THAP domain containing 11
See related
Ensembl:ENSCGRG00015033619
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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See Thap11 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614050.1 (1190821..1192637, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 3 NC_048596.1 (182139936..182141751)

NW_003614050.1Genomic Context describing neighboring genes Neighboring gene enhancer of mRNA decapping 4 Neighboring gene nuclear transport factor 2 Neighboring gene centromere protein T Neighboring gene translin associated factor X interacting protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
THAP domain-containing protein 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614050.1 Reference CriGri_1.0 Primary Assembly

    Range
    1190821..1192637 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003504289.5 → XP_003504337.1  THAP domain-containing protein 11

    See identical proteins and their annotated locations for XP_003504337.1

    UniProtKB/TrEMBL
    G3HKX3
    Conserved Domains (1) summary
    pfam05485
    Location:5 → 81
    THAP; THAP domain

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048596.1 Alternate CriGri-PICRH-1.0

    Range
    182139936..182141751
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027405861.2 → XP_027261662.1  THAP domain-containing protein 11

    UniProtKB/TrEMBL
    G3HKX3
    Related
    ENSCGRP00015044142.1, ENSCGRT00015070812.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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