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Mmadhc metabolism of cobalamin associated D [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100751326, updated on 8-Mar-2024

Summary

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Gene symbol
Mmadhc
Gene description
metabolism of cobalamin associated D
See related
Ensembl:ENSCGRG00015013171
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See Mmadhc in Genome Data Viewer
Location:
chromosome: 6
Exon count:
7
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003616264.1 (6845..22687)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 6 NC_048599.1 (124013220..124029488)

NW_003616264.1Genomic Context describing neighboring genes Neighboring gene LY6/PLAUR domain containing 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cobalamin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cobalamin trafficking protein CblD
Names
Methylmalonic aciduria and homocystinuria type D-like, mitochondrial
methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria
methylmalonic aciduria and homocystinuria, cblD type
putative methylmalonic aciduria and homocystinuria type D like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003616264.1 Reference CriGri_1.0 Primary Assembly

    Range
    6845..22687
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003513988.5 → XP_003514036.2  cobalamin trafficking protein CblD isoform X1

    Conserved Domains (1) summary
    pfam10229
    Location:100 → 369
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048599.1 Alternate CriGri-PICRH-1.0

    Range
    124013220..124029488
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027420457.2 → XP_027276258.2  cobalamin trafficking protein CblD isoform X2

    UniProtKB/TrEMBL
    G3IH14
    Related
    ENSCGRP00015017094.2, ENSCGRT00015020985.2
    Conserved Domains (1) summary
    pfam10229
    Location:24 → 293
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein

  2. XM_027420455.2 → XP_027276256.1  cobalamin trafficking protein CblD isoform X2

    UniProtKB/TrEMBL
    G3IH14
    Conserved Domains (1) summary
    pfam10229
    Location:24 → 293
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein

  3. XM_027420456.2 → XP_027276257.1  cobalamin trafficking protein CblD isoform X3

    UniProtKB/TrEMBL
    A0A9J7G878
    Related
    ENSCGRP00015044289.1, ENSCGRT00015052385.1
Nucleotide Protein Strain
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