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Pigz phosphatidylinositol glycan anchor biosynthesis class Z [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100750622, updated on 8-Mar-2024

Summary

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Gene symbol
Pigz
Gene description
phosphatidylinositol glycan anchor biosynthesis class Z
Locus tag
I79_000614
See related
Ensembl:ENSCGRG00015042711
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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See Pigz in Genome Data Viewer
Location:
chromosome: 4
Exon count:
2
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613591.1 (1518525..1523030)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 4 NC_048597.1 (57553140..57557645, complement)

NW_003613591.1Genomic Context describing neighboring genes Neighboring gene discs large MAGUK scaffold protein 1 Neighboring gene uncharacterized LOC118238793 Neighboring gene melanotransferrin Neighboring gene NCBP2 antisense 2 (head to head) Neighboring gene nuclear cap binding protein subunit 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613591.1 Reference CriGri_1.0 Primary Assembly

    Range
    1518525..1523030
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035454242.1 → XP_035310133.1  GPI mannosyltransferase 4

    UniProtKB/TrEMBL
    A0A8C2M9U5, G3GSJ9
    Conserved Domains (1) summary
    cl21590
    Location:15 → 405
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048597.1 Alternate CriGri-PICRH-1.0

    Range
    57553140..57557645 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035444642.1 → XP_035300533.1  GPI mannosyltransferase 4

    UniProtKB/TrEMBL
    A0A8C2M9U5, G3GSJ9
    Related
    ENSCGRP00015059376.1, ENSCGRT00015054848.1
    Conserved Domains (1) summary
    cl21590
    Location:15 → 405
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein Strain
Heading Accession and Version

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