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LOC100744579 methylmalonic aciduria and homocystinuria type D homolog, mitochondrial [ Bombus impatiens (common eastern bumble bee) ]

Gene ID: 100744579, updated on 10-Oct-2024

Summary

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Gene symbol
LOC100744579
Gene description
methylmalonic aciduria and homocystinuria type D homolog, mitochondrial
See related
EnsemblRapid:ENSBIMG00000017952
Gene type
protein coding
RefSeq status
MODEL
Organism
Bombus impatiens
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Bombus; Pyrobombus
Orthologs
fruit fly honey bee all
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Genomic context

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See LOC100744579 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
103 current BIMP_2.2 (GCF_000188095.3) Unplaced Scaffold NT_177066.1 (1464040..1465742)

NT_177066.1Genomic Context describing neighboring genes Neighboring gene serine/threonine-protein kinase PAK mbt Neighboring gene gastrula zinc finger protein XlCGF57.1 Neighboring gene Regulator of cullins 2 Neighboring gene Trehalose transporter 1-1 Neighboring gene clavesin-2 Neighboring gene uncharacterized LOC117152096 Neighboring gene rhophilin Neighboring gene touch insensitive larva B

Genomic regions, transcripts, and products

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Genomic Sequence:
NT_177066 Unplaced Scaffold Reference BIMP_2.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genes involved in convergent evolution of eusociality in bees. Woodard SH, et al. Proc Natl Acad Sci U S A, 2011 May 3. PMID 21482769, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cobalamin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
methylmalonic aciduria and homocystinuria type D homolog, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bombus impatiens Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BIMP_2.2

Genomic

  1. NT_177066.1 Reference BIMP_2.2

    Range
    1464040..1465742
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033322653.1 → XP_033178544.1  methylmalonic aciduria and homocystinuria type D homolog, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A6P3V0C9
    Related
    ENSBIMP00000029535.1, ENSBIMT00000003398.1
    Conserved Domains (1) summary
    pfam10229
    Location:61 → 274
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein

  2. XM_012389489.3 → XP_012244912.1  methylmalonic aciduria and homocystinuria type D homolog, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A6P3V0C9
    Conserved Domains (1) summary
    pfam10229
    Location:61 → 274
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein

  3. XM_012389490.3 → XP_012244913.1  methylmalonic aciduria and homocystinuria type D homolog, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A6P3V064
    Conserved Domains (1) summary
    pfam10229
    Location:61 → 237
    DUF2246; Uncharacterized conserved protein (DUF2246)
Nucleotide Protein
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