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Plec plectin [ Cavia porcellus (domestic guinea pig) ]

Gene ID: 100735713, updated on 6-Jun-2024

Summary

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Gene symbol
Plec
Gene description
plectin
See related
Ensembl:ENSCPOG00000007957
Gene type
protein coding
RefSeq status
MODEL
Organism
Cavia porcellus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
Orthologs
human mouse all
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Genomic context

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See Plec in Genome Data Viewer
Location:
chromosome: Un
Exon count:
43
Annotation release Status Assembly Chr Location
RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947502.1 (64593777..64653489, complement)
103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176324.1 (3027490..3063077, complement)

NW_026947502.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA2/SNORA34 family Neighboring gene dual specificity protein phosphatase 18-like Neighboring gene uncharacterized LOC134471677 Neighboring gene poly(ADP-ribose) polymerase family member 10 Neighboring gene uncharacterized LOC134471678 Neighboring gene glutamate ionotropic receptor NMDA type subunit associated protein 1 Neighboring gene uncharacterized LOC111755183 Neighboring gene spermatogenesis and centriole associated 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ankyrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of muscle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in hemidesmosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intermediate filament cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in wound healing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in focal adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in hemidesmosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intermediate filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in perinuclear region of cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
plectin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCavPor4.1

Genomic

  1. NW_026947502.1 Reference mCavPor4.1

    Range
    64593777..64653489 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063231213.1 → XP_063087283.1  plectin isoform X5

    UniProtKB/TrEMBL
    A0A286XDE3

  2. XM_063231237.1 → XP_063087307.1  plectin isoform X28

  3. XM_063231215.1 → XP_063087285.1  plectin isoform X7

    UniProtKB/TrEMBL
    A0A286XDE3

  4. XM_063231214.1 → XP_063087284.1  plectin isoform X6

    UniProtKB/TrEMBL
    A0A286XDE3

  5. XM_063231228.1 → XP_063087298.1  plectin isoform X20

    UniProtKB/TrEMBL
    A0A286XDE3

  6. XM_063231224.1 → XP_063087294.1  plectin isoform X16

    UniProtKB/TrEMBL
    A0A286XDE3

  7. XM_063231222.1 → XP_063087292.1  plectin isoform X14

    UniProtKB/TrEMBL
    A0A286XDE3

  8. XM_063231235.1 → XP_063087305.1  plectin isoform X26

    UniProtKB/TrEMBL
    A0A286XDE3

  9. XM_063231231.1 → XP_063087301.1  plectin isoform X22

    UniProtKB/TrEMBL
    A0A286XDE3

  10. XM_063231230.1 → XP_063087300.1  plectin isoform X21

    UniProtKB/TrEMBL
    A0A286XDE3

  11. XM_063231210.1 → XP_063087280.1  plectin isoform X2

    UniProtKB/TrEMBL
    H0VB93

  12. XM_063231211.1 → XP_063087281.1  plectin isoform X3

    UniProtKB/TrEMBL
    A0A286XBZ1

  13. XM_013145738.3 → XP_013001192.2  plectin isoform X1

    UniProtKB/TrEMBL
    A0A286XBZ1

  14. XM_063231212.1 → XP_063087282.1  plectin isoform X4

    UniProtKB/TrEMBL
    H0VB93

  15. XM_063231232.1 → XP_063087302.1  plectin isoform X23

    UniProtKB/TrEMBL
    A0A286XDE3

  16. XM_063231236.1 → XP_063087306.1  plectin isoform X27

    UniProtKB/TrEMBL
    A0A286XDE3

  17. XM_063231234.1 → XP_063087304.1  plectin isoform X25

    UniProtKB/TrEMBL
    A0A286XDE3

  18. XM_063231233.1 → XP_063087303.1  plectin isoform X24

    UniProtKB/TrEMBL
    A0A286XDE3

  19. XM_063231226.1 → XP_063087296.1  plectin isoform X18

    UniProtKB/TrEMBL
    A0A286XDE3

  20. XM_063231220.1 → XP_063087290.1  plectin isoform X12

    UniProtKB/TrEMBL
    A0A286XDE3

  21. XM_063231223.1 → XP_063087293.1  plectin isoform X15

    UniProtKB/TrEMBL
    A0A286XDE3

  22. XM_063231217.1 → XP_063087287.1  plectin isoform X9

    UniProtKB/TrEMBL
    A0A286XDE3

  23. XM_063231225.1 → XP_063087295.1  plectin isoform X17

    UniProtKB/TrEMBL
    A0A286XDE3

  24. XM_063231219.1 → XP_063087289.1  plectin isoform X11

    UniProtKB/TrEMBL
    A0A286XDE3

  25. XM_063231216.1 → XP_063087286.1  plectin isoform X8

    UniProtKB/TrEMBL
    A0A286XDE3

  26. XM_063231227.1 → XP_063087297.1  plectin isoform X19

    UniProtKB/TrEMBL
    A0A286XDE3

  27. XM_063231221.1 → XP_063087291.1  plectin isoform X13

    UniProtKB/TrEMBL
    A0A286XDE3

  28. XM_063231218.1 → XP_063087288.1  plectin isoform X10

    UniProtKB/TrEMBL
    A0A286XDE3
Nucleotide Protein
Heading Accession and Version

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