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Ddx24 DEAD-box helicase 24 [ Cavia porcellus (domestic guinea pig) ]

Gene ID: 100734956, updated on 8-Mar-2024

Summary

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Gene symbol
Ddx24
Gene description
DEAD-box helicase 24
See related
Ensembl:ENSCPOG00000005884
Gene type
protein coding
RefSeq status
MODEL
Organism
Cavia porcellus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
Orthologs
human mouse all
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Genomic context

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See Ddx24 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947514.1 (11282978..11303569, complement)
103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176290.1 (776577..797182)

NW_026947514.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 197 Neighboring gene OTU deubiquitinase, ubiquitin aldehyde binding 2 Neighboring gene uncharacterized LOC134474242 Neighboring gene interferon alpha-inducible protein 27, mitochondrial-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-dependent RNA helicase DDX24
Names
DEAD (Asp-Glu-Ala-Asp) box polypeptide 24

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCavPor4.1

Genomic

  1. NW_026947514.1 Reference mCavPor4.1

    Range
    11282978..11303569 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013144389.3 → XP_012999843.1  ATP-dependent RNA helicase DDX24 isoform X2

    UniProtKB/TrEMBL
    A0A286XBM9
    Related
    ENSCPOP00000022853.1
    Conserved Domains (3) summary
    PRK01297
    Location:118 → 660
    PRK01297; ATP-dependent RNA helicase RhlB; Provisional
    pfam00271
    Location:525 → 633
    Helicase_C; Helicase conserved C-terminal domain
    cl21455
    Location:193 → 463
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  2. XM_003462630.5 → XP_003462678.1  ATP-dependent RNA helicase DDX24 isoform X1

    UniProtKB/TrEMBL
    H0V6J0
    Related
    ENSCPOP00000005309.3
    Conserved Domains (3) summary
    PRK01297
    Location:118 → 692
    PRK01297; ATP-dependent RNA helicase RhlB; Provisional
    pfam00271
    Location:557 → 665
    Helicase_C; Helicase conserved C-terminal domain
    cl21455
    Location:193 → 495
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
Heading Accession and Version

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