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Map3k13 mitogen-activated protein kinase kinase kinase 13 [ Cavia porcellus (domestic guinea pig) ]

Gene ID: 100727150, updated on 3-Apr-2024

Summary

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Gene symbol
Map3k13
Gene description
mitogen-activated protein kinase kinase kinase 13
See related
Ensembl:ENSCPOG00000014720
Gene type
protein coding
RefSeq status
MODEL
Organism
Cavia porcellus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
Orthologs
human mouse all
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Genomic context

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See Map3k13 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947497.1 (67083126..67239505)
103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176412.1 (50494583..50617500)

NW_026947497.1Genomic Context describing neighboring genes Neighboring gene peroxisomal bifunctional enzyme-like Neighboring gene polyadenylate-binding protein 1-like Neighboring gene small nucleolar RNA SNORA2/SNORA34 family Neighboring gene transmembrane protein 41A Neighboring gene lipase H

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables MAP kinase kinase kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein homodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in JNK cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of NF-kappaB transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein autophosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitogen-activated protein kinase kinase kinase 13

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCavPor4.1

Genomic

  1. NW_026947497.1 Reference mCavPor4.1

    Range
    67083126..67239505
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063261181.1 → XP_063117251.1  mitogen-activated protein kinase kinase kinase 13 isoform X1

    UniProtKB/TrEMBL
    H0VRP2

  2. XM_063261182.1 → XP_063117252.1  mitogen-activated protein kinase kinase kinase 13 isoform X1

    UniProtKB/TrEMBL
    H0VRP2

  3. XM_063261180.1 → XP_063117250.1  mitogen-activated protein kinase kinase kinase 13 isoform X1

    UniProtKB/TrEMBL
    H0VRP2

  4. XM_013160210.3 → XP_013015664.1  mitogen-activated protein kinase kinase kinase 13 isoform X1

    See identical proteins and their annotated locations for XP_013015664.1

    UniProtKB/TrEMBL
    H0VRP2
    Related
    ENSCPOP00000023929.1
    Conserved Domains (2) summary
    smart00221
    Location:168 → 402
    STYKc; Protein kinase; unclassified specificity
    cd14059
    Location:174 → 410
    STKc_MAP3K12_13; Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinases 12 and 13

  5. XM_003477067.5 → XP_003477115.1  mitogen-activated protein kinase kinase kinase 13 isoform X1

    See identical proteins and their annotated locations for XP_003477115.1

    UniProtKB/TrEMBL
    H0VRP2
    Related
    ENSCPOP00000031012.1
    Conserved Domains (2) summary
    smart00221
    Location:168 → 402
    STYKc; Protein kinase; unclassified specificity
    cd14059
    Location:174 → 410
    STKc_MAP3K12_13; Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinases 12 and 13

  6. XM_013160211.2 → XP_013015665.1  mitogen-activated protein kinase kinase kinase 13 isoform X2

    Conserved Domains (1) summary
    cl21453
    Location:23 → 213
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
Heading Accession and Version

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